Threads

Threads is a threading-based method to reconstruct the ancestral recombination graph (ARG) from large datasets of sequenced, imputed, or genotyped genomes and to perform ARG-based genotype imputation.

Links

• Software and manual

Paper

A scalable approach for genome-wide inference of ancestral recombination graphs. Á. Gunnarsson, J. Zhu, B. C. Zhang, Z. Tsangalidou, A. Allmont, P. Palamara. bioRxiv. 2024. [paper]